Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC006480.2-201ENST00000609770 1337 ntBASIC17.45■□□□□ 0.38
CTNND1O60716 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.44■□□□□ 0.38
CTNND1O60716 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.44■□□□□ 0.38
CTNND1O60716 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.44■□□□□ 0.38
CTNND1O60716 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CTNND1O60716 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.44■□□□□ 0.38
CTNND1O60716 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.44■□□□□ 0.38
CTNND1O60716 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 AC253536.4-201ENST00000440539 267 ntBASIC17.44■□□□□ 0.38
CTNND1O60716 CICP12-201ENST00000455801 843 ntBASIC17.44■□□□□ 0.38
CTNND1O60716 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.44■□□□□ 0.38
CTNND1O60716 MIR4754-201ENST00000582477 89 ntBASIC17.44■□□□□ 0.38
CTNND1O60716 MIR5572-201ENST00000583188 137 ntBASIC17.44■□□□□ 0.38
CTNND1O60716 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.44■□□□□ 0.38
CTNND1O60716 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.44■□□□□ 0.38
CTNND1O60716 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 AC136759.1-202ENST00000530858 2194 ntBASIC17.44■□□□□ 0.38
CTNND1O60716 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CTNND1O60716 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.44■□□□□ 0.38
CTNND1O60716 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.44■□□□□ 0.38
CTNND1O60716 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.44■□□□□ 0.38
CTNND1O60716 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.44■□□□□ 0.38
CTNND1O60716 AC023090.2-201ENST00000625182 2110 ntBASIC17.44■□□□□ 0.38
CTNND1O60716 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTNND1O60716 AC087481.3-201ENST00000602886 1894 ntBASIC17.44■□□□□ 0.38
CTNND1O60716 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 SALL4P5-201ENST00000419001 1760 ntBASIC17.43■□□□□ 0.38
CTNND1O60716 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.43■□□□□ 0.38
CTNND1O60716 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.43■□□□□ 0.38
CTNND1O60716 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.43■□□□□ 0.38
CTNND1O60716 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.43■□□□□ 0.38
CTNND1O60716 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTNND1O60716 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.43■□□□□ 0.38
CTNND1O60716 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 AC239868.1-201ENST00000369385 493 ntBASIC17.43■□□□□ 0.38
CTNND1O60716 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.43■□□□□ 0.38
CTNND1O60716 AC078875.1-201ENST00000431907 724 ntBASIC17.43■□□□□ 0.38
CTNND1O60716 AC073150.1-201ENST00000450406 1084 ntBASIC17.43■□□□□ 0.38
CTNND1O60716 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.43■□□□□ 0.38
CTNND1O60716 POU5F1P2-201ENST00000521750 823 ntBASIC17.43■□□□□ 0.38
CTNND1O60716 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.43■□□□□ 0.38
CTNND1O60716 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.43■□□□□ 0.38
CTNND1O60716 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.43■□□□□ 0.38
CTNND1O60716 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.43■□□□□ 0.38
CTNND1O60716 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.43■□□□□ 0.38
CTNND1O60716 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.43■□□□□ 0.38
CTNND1O60716 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CTNND1O60716 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.43■□□□□ 0.38
CTNND1O60716 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNND1O60716 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.43■□□□□ 0.38
CTNND1O60716 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.42■□□□□ 0.38
CTNND1O60716 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.42■□□□□ 0.38
CTNND1O60716 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTNND1O60716 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTNND1O60716 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms