Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SSSCA1O60232 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 AC105206.1-202ENST00000314927 2368 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SSSCA1O60232 AC004899.2-201ENST00000622993 3860 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SSSCA1O60232 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
SSSCA1O60232 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SSSCA1O60232 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 AL354702.1-201ENST00000442006 1960 ntBASIC12.32□□□□□ -0.44
SSSCA1O60232 AC016397.2-201ENST00000624848 1985 ntBASIC12.32□□□□□ -0.44
SSSCA1O60232 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.32□□□□□ -0.44
SSSCA1O60232 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SSSCA1O60232 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SSSCA1O60232 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SSSCA1O60232 AL133267.1-201ENST00000398220 340 ntBASIC12.32□□□□□ -0.44
SSSCA1O60232 AC104457.1-201ENST00000401024 814 ntBASIC12.32□□□□□ -0.44
SSSCA1O60232 HIST3H2BA-201ENST00000436555 524 ntBASIC12.32□□□□□ -0.44
SSSCA1O60232 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.32□□□□□ -0.44
SSSCA1O60232 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.32□□□□□ -0.44
SSSCA1O60232 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.32□□□□□ -0.44
SSSCA1O60232 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
SSSCA1O60232 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.32□□□□□ -0.44
SSSCA1O60232 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 AC243562.1-201ENST00000560672 389 ntBASIC12.32□□□□□ -0.44
SSSCA1O60232 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.32□□□□□ -0.44
SSSCA1O60232 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.32□□□□□ -0.44
SSSCA1O60232 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 AL691432.3-201ENST00000621860 400 ntBASIC12.32□□□□□ -0.44
SSSCA1O60232 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.32□□□□□ -0.44
SSSCA1O60232 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.32□□□□□ -0.44
SSSCA1O60232 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.32□□□□□ -0.44
SSSCA1O60232 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.32□□□□□ -0.44
SSSCA1O60232 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
SSSCA1O60232 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.32□□□□□ -0.44
SSSCA1O60232 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.32□□□□□ -0.44
SSSCA1O60232 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSSCA1O60232 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
SSSCA1O60232 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 AC018665.1-201ENST00000622927 1362 ntBASIC12.31□□□□□ -0.44
SSSCA1O60232 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.31□□□□□ -0.44
SSSCA1O60232 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.31□□□□□ -0.44
SSSCA1O60232 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.31□□□□□ -0.44
SSSCA1O60232 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms