Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC009093.7-201ENST00000623853 1223 ntBASIC15.29■□□□□ 0.04
RIPK2O43353 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.29■□□□□ 0.04
RIPK2O43353 AL109936.8-201ENST00000641772 604 ntBASIC15.29■□□□□ 0.04
RIPK2O43353 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RIPK2O43353 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.29■□□□□ 0.04
RIPK2O43353 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.29■□□□□ 0.04
RIPK2O43353 RN7SL832P-201ENST00000607781 1756 ntBASIC15.29■□□□□ 0.04
RIPK2O43353 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 AL158070.2-201ENST00000623713 1621 ntBASIC15.28■□□□□ 0.04
RIPK2O43353 AC027612.1-201ENST00000445234 2395 ntBASIC15.28■□□□□ 0.04
RIPK2O43353 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.28■□□□□ 0.04
RIPK2O43353 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.28■□□□□ 0.04
RIPK2O43353 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 AC004461.2-201ENST00000629517 803 ntBASIC15.28■□□□□ 0.04
RIPK2O43353 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
RIPK2O43353 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RIPK2O43353 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RIPK2O43353 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RIPK2O43353 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.27■□□□□ 0.04
RIPK2O43353 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.27■□□□□ 0.04
RIPK2O43353 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RIPK2O43353 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RIPK2O43353 COL6A4P2-202ENST00000504443 2753 ntBASIC15.27■□□□□ 0.04
RIPK2O43353 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RIPK2O43353 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.27■□□□□ 0.04
RIPK2O43353 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
RIPK2O43353 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.27■□□□□ 0.04
RIPK2O43353 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RIPK2O43353 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RIPK2O43353 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 SPDYE7P-202ENST00000420373 878 ntBASIC15.27■□□□□ 0.04
RIPK2O43353 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.27■□□□□ 0.04
RIPK2O43353 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RIPK2O43353 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.27■□□□□ 0.04
RIPK2O43353 AC051619.7-201ENST00000568314 623 ntBASIC15.27■□□□□ 0.04
RIPK2O43353 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RIPK2O43353 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RIPK2O43353 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RIPK2O43353 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms