Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
FOXN1O15353 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN1O15353 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
FOXN1O15353 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXN1O15353 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
FOXN1O15353 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FOXN1O15353 ACTBP8-201ENST00000403258 1108 ntBASIC17.88■□□□□ 0.45
FOXN1O15353 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 HIST2H2BB-201ENST00000449108 381 ntBASIC17.88■□□□□ 0.45
FOXN1O15353 AC018463.1-201ENST00000456674 917 ntBASIC17.88■□□□□ 0.45
FOXN1O15353 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXN1O15353 AC027139.1-201ENST00000565286 951 ntBASIC17.88■□□□□ 0.45
FOXN1O15353 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXN1O15353 AC007718.1-201ENST00000621078 280 ntBASIC17.88■□□□□ 0.45
FOXN1O15353 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXN1O15353 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXN1O15353 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FOXN1O15353 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FOXN1O15353 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN1O15353 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FOXN1O15353 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
FOXN1O15353 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN1O15353 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN1O15353 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN1O15353 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 SERBP1P2-201ENST00000436888 1164 ntBASIC17.87■□□□□ 0.45
FOXN1O15353 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXN1O15353 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.87■□□□□ 0.45
FOXN1O15353 ALG1L6P-201ENST00000515248 758 ntBASIC17.87■□□□□ 0.45
FOXN1O15353 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXN1O15353 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXN1O15353 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXN1O15353 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.87■□□□□ 0.45
FOXN1O15353 AC007881.3-201ENST00000608897 607 ntBASIC17.87■□□□□ 0.45
FOXN1O15353 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXN1O15353 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
FOXN1O15353 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
FOXN1O15353 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXN1O15353 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN1O15353 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 AC127383.1-201ENST00000444697 1800 ntBASIC17.86■□□□□ 0.45
FOXN1O15353 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
FOXN1O15353 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXN1O15353 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXN1O15353 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms