Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
E2F3O00716 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.69□□□□□ -0.06
E2F3O00716 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
E2F3O00716 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.69□□□□□ -0.06
E2F3O00716 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.69□□□□□ -0.06
E2F3O00716 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 PCDHA3-202ENST00000532566 4594 ntBASIC14.68□□□□□ -0.06
E2F3O00716 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
E2F3O00716 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.68□□□□□ -0.06
E2F3O00716 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
E2F3O00716 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 AL354702.1-201ENST00000442006 1960 ntBASIC14.68□□□□□ -0.06
E2F3O00716 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.68□□□□□ -0.06
E2F3O00716 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.68□□□□□ -0.06
E2F3O00716 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.68□□□□□ -0.06
E2F3O00716 RPS2P32-201ENST00000439199 892 ntBASIC14.68□□□□□ -0.06
E2F3O00716 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 TPT1P11-201ENST00000458482 498 ntBASIC14.68□□□□□ -0.06
E2F3O00716 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.68□□□□□ -0.06
E2F3O00716 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.68□□□□□ -0.06
E2F3O00716 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 AC104596.2-201ENST00000512793 793 ntBASIC14.68□□□□□ -0.06
E2F3O00716 KRT17P8-201ENST00000540749 863 ntBASIC14.68□□□□□ -0.06
E2F3O00716 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.68□□□□□ -0.06
E2F3O00716 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.68□□□□□ -0.06
E2F3O00716 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.68□□□□□ -0.06
E2F3O00716 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
E2F3O00716 MIR6799-201ENST00000620297 69 ntBASIC14.68□□□□□ -0.06
E2F3O00716 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.68□□□□□ -0.06
E2F3O00716 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 GRK6P1-201ENST00000400595 1711 ntBASIC14.68□□□□□ -0.06
E2F3O00716 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.68□□□□□ -0.06
E2F3O00716 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
E2F3O00716 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 AC027601.5-201ENST00000624065 2482 ntBASIC14.68□□□□□ -0.06
E2F3O00716 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
E2F3O00716 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
E2F3O00716 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.68□□□□□ -0.06
E2F3O00716 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
E2F3O00716 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
E2F3O00716 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
E2F3O00716 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
E2F3O00716 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.67□□□□□ -0.06
E2F3O00716 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
E2F3O00716 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.67□□□□□ -0.06
E2F3O00716 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.67□□□□□ -0.06
E2F3O00716 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.67□□□□□ -0.06
E2F3O00716 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
E2F3O00716 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
E2F3O00716 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
E2F3O00716 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
E2F3O00716 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.67□□□□□ -0.06
E2F3O00716 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
E2F3O00716 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
E2F3O00716 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
E2F3O00716 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
E2F3O00716 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
E2F3O00716 HSPA7-201ENST00000445535 1927 ntBASIC14.67□□□□□ -0.06
E2F3O00716 RNU1-114P-201ENST00000365297 166 ntBASIC14.67□□□□□ -0.06
E2F3O00716 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.67□□□□□ -0.06
E2F3O00716 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.67□□□□□ -0.06
E2F3O00716 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.67□□□□□ -0.06
E2F3O00716 RN7SL837P-201ENST00000463010 287 ntBASIC14.67□□□□□ -0.06
E2F3O00716 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
E2F3O00716 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.67□□□□□ -0.06
E2F3O00716 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms