Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 FAM86HP-204ENST00000513466 959 ntBASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AL133338.1-201ENST00000565695 1517 ntBASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AC012508.2-201ENST00000567613 1472 ntBASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 KRT8P14-201ENST00000414254 1442 ntBASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NPIPA3F8WFD2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 CD8B2-202ENST00000417670 633 ntBASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 GOLGA2P4-201ENST00000441462 777 ntBASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 HOMER2P2-201ENST00000451621 847 ntBASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 ENPP7P14-201ENST00000621765 1040 ntBASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA3F8WFD2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms