Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 HLA-K-203ENST00000430151 1046 ntBASIC11.32□□□□□ -0.6
KNCNA6PVL3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 ENPP7P5-201ENST00000541031 1031 ntBASIC11.32□□□□□ -0.6
KNCNA6PVL3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 CLUHP6-201ENST00000580789 941 ntBASIC11.32□□□□□ -0.6
KNCNA6PVL3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 AC015656.1-201ENST00000624209 3578 ntBASIC11.32□□□□□ -0.6
KNCNA6PVL3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KNCNA6PVL3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.32□□□□□ -0.6
KNCNA6PVL3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AC098614.1-201ENST00000368528 745 ntBASIC11.31□□□□□ -0.6
KNCNA6PVL3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AL035633.1-201ENST00000406139 838 ntBASIC11.31□□□□□ -0.6
KNCNA6PVL3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 NUS1P3-201ENST00000423502 862 ntBASIC11.31□□□□□ -0.6
KNCNA6PVL3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 TDH-203ENST00000531764 1110 ntBASIC11.31□□□□□ -0.6
KNCNA6PVL3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AP001063.1-201ENST00000568332 529 ntBASIC11.31□□□□□ -0.6
KNCNA6PVL3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.31□□□□□ -0.6
KNCNA6PVL3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 AL137783.1-201ENST00000623494 1896 ntBASIC11.31□□□□□ -0.6
KNCNA6PVL3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
KNCNA6PVL3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KNCNA6PVL3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms