Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
RAI2Q9Y5P3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 TPM3P8-201ENST00000330554 643 ntBASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 FAM197Y7-201ENST00000432892 766 ntBASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 KRT90P-201ENST00000549264 1064 ntBASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 AL161772.1-201ENST00000610494 4412 ntBASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI2Q9Y5P3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 POM121L8P-201ENST00000417732 1281 ntBASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 POM121L9P-203ENST00000441984 1285 ntBASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 AL590640.2-201ENST00000457038 527 ntBASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 RNA5SP486-201ENST00000515961 83 ntBASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 RNA5SP412-201ENST00000516234 123 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms