Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA11Q9Y5H2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 AC007541.1-201ENST00000570282 1469 ntBASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 BX640514.1-201ENST00000583223 1918 ntBASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 SOCS2P1-201ENST00000417727 557 ntBASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 AC092552.1-201ENST00000547243 906 ntBASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 AC123567.1-201ENST00000548294 1261 ntBASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 AL132655.2-201ENST00000596276 594 ntBASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ACTG1P22-201ENST00000603793 1099 ntBASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 TMEM261P1-201ENST00000604899 340 ntBASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDHGA11Q9Y5H2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
PCDHGA11Q9Y5H2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.07
PCDHGA11Q9Y5H2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
PCDHGA11Q9Y5H2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 LINC01230-201ENST00000625222 3017 ntBASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 HLA-K-203ENST00000430151 1046 ntBASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms