Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 TFAMP1-201ENST00000412727 736 ntBASIC14.27□□□□□ -0.13
AP4S1Q9Y587 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 AP000842.3-202ENST00000569238 1080 ntBASIC14.27□□□□□ -0.13
AP4S1Q9Y587 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 AL121912.1-201ENST00000603683 238 ntBASIC14.27□□□□□ -0.13
AP4S1Q9Y587 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.27□□□□□ -0.13
AP4S1Q9Y587 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP4S1Q9Y587 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 AC020910.6-201ENST00000623084 1459 ntBASIC14.25□□□□□ -0.13
AP4S1Q9Y587 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms