Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AC000095.1-201ENST00000603208 874 ntBASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 MIR6080-201ENST00000617359 66 ntBASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AL513210.1-201ENST00000629608 234 ntBASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AC016397.2-201ENST00000624848 1985 ntBASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 AC093520.2-201ENST00000561830 333 ntBASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 NME4-212ENST00000621774 904 ntTSL 3 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 AC089987.1-201ENST00000551654 2209 ntBASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms