Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.09■□□□□ 0.33
SYNPO2Q9UMS6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SYNPO2Q9UMS6 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 RNA5SP423-201ENST00000517127 109 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 RN7SL574P-201ENST00000581512 297 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 MIR3188-201ENST00000583494 85 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AC097724.1-201ENST00000609581 426 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AL157813.1-201ENST00000612996 587 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AL353770.1-201ENST00000614915 403 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AC015967.2-201ENST00000624092 234 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AC006435.4-201ENST00000625037 234 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 AL356737.1-201ENST00000634391 234 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SYNPO2Q9UMS6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 AC090857.1-201ENST00000527400 390 ntBASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SYNPO2Q9UMS6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 KRT8P21-201ENST00000430398 1491 ntBASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms