Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CPNE7Q9UBL6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CPNE7Q9UBL6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE7Q9UBL6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE7Q9UBL6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE7Q9UBL6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CPNE7Q9UBL6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE7Q9UBL6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE7Q9UBL6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.58□□□□□ -0.07
CPNE7Q9UBL6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 RN7SKP175-201ENST00000408472 289 ntBASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 HSPB1P2-201ENST00000448722 546 ntBASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 AL109954.1-202ENST00000564051 2148 ntBASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 MIR6787-201ENST00000616675 61 ntBASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 INE2-201ENST00000630399 1874 ntBASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE7Q9UBL6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AC011840.2-201ENST00000563063 1520 ntBASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AC073347.1-201ENST00000421633 2643 ntBASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 MIR663B-201ENST00000408361 115 ntBASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AC006033.1-201ENST00000440505 426 ntBASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 MIR4683-201ENST00000579659 81 ntBASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AP001002.3-201ENST00000623482 206 ntBASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AL008638.5-201ENST00000623814 1298 ntBASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AC022532.1-201ENST00000624563 1728 ntBASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 AC023090.2-201ENST00000625182 2110 ntBASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CPNE7Q9UBL6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms