Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 AC020907.1-201ENST00000616460 1350 ntBASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 AC055811.4-201ENST00000624039 1754 ntBASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 BCRP2-202ENST00000447763 634 ntBASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 BCRP6-201ENST00000510112 632 ntBASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 BCRP7-201ENST00000511549 544 ntBASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 AC022616.1-201ENST00000518688 554 ntBASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 AC145423.3-201ENST00000615987 467 ntBASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUEDC1Q9NWM3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 AL355864.2-201ENST00000447420 863 ntBASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 DUX4L47-201ENST00000566374 394 ntBASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 AC233724.13-201ENST00000598383 410 ntBASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 AC006213.4-201ENST00000616184 634 ntBASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
CUEDC1Q9NWM3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms