Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 AP002353.1-201ENST00000528257 1599 ntBASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 SSR4P1-203ENST00000599569 2260 ntBASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC52A1Q9NWF4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 AC011270.2-201ENST00000624293 2550 ntBASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 TMBIM7P-203ENST00000641617 1718 ntBASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 AC138701.2-201ENST00000553634 226 ntBASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 FO393412.1-201ENST00000619841 382 ntBASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A1Q9NWF4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 AC004837.1-201ENST00000446267 564 ntBASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 DPY19L2P5-201ENST00000456300 331 ntBASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 MIR5196-201ENST00000578146 115 ntBASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 MIR2392-201ENST00000584881 84 ntBASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A1Q9NWF4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 RNA5SP417-201ENST00000516459 108 ntBASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 AL022344.2-201ENST00000568976 968 ntBASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 AC007952.4-201ENST00000573866 637 ntBASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms