Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 CICP20-201ENST00000443330 2801 ntBASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 MRPS18AP1-201ENST00000414458 589 ntBASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 ARSEP1-201ENST00000420443 635 ntBASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 AC027369.6-201ENST00000525520 931 ntBASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 MIR4453-201ENST00000584019 89 ntBASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.39□□□□□ -0.11
CCM2LQ9NUG4 CICP8-201ENST00000455800 2813 ntBASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 AC105206.1-202ENST00000314927 2368 ntBASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 MIR346-201ENST00000362234 95 ntBASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 AC084121.4-201ENST00000641598 221 ntBASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 AF228730.8-201ENST00000642140 221 ntBASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCM2LQ9NUG4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms