Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GCM1Q9NP62 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCM1Q9NP62 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCM1Q9NP62 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.92□□□□□ -0.34
GCM1Q9NP62 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
GCM1Q9NP62 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.92□□□□□ -0.34
GCM1Q9NP62 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.92□□□□□ -0.34
GCM1Q9NP62 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 AL359258.3-201ENST00000622910 2331 ntBASIC12.91□□□□□ -0.34
GCM1Q9NP62 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 AC006486.2-201ENST00000624246 2199 ntBASIC12.91□□□□□ -0.34
GCM1Q9NP62 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 AL355864.2-201ENST00000447420 863 ntBASIC12.91□□□□□ -0.34
GCM1Q9NP62 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 AP001889.1-201ENST00000525414 633 ntBASIC12.91□□□□□ -0.34
GCM1Q9NP62 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 AL022328.1-201ENST00000610050 478 ntBASIC12.91□□□□□ -0.34
GCM1Q9NP62 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 WASH3P-207ENST00000560956 1394 ntBASIC12.91□□□□□ -0.34
GCM1Q9NP62 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GCM1Q9NP62 AP000845.1-201ENST00000581677 2131 ntBASIC12.91□□□□□ -0.34
GCM1Q9NP62 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
GCM1Q9NP62 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 KRT8P35-201ENST00000483942 1338 ntBASIC12.9□□□□□ -0.34
GCM1Q9NP62 AL360270.3-201ENST00000609118 1348 ntBASIC12.9□□□□□ -0.34
GCM1Q9NP62 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 KRT8P14-201ENST00000414254 1442 ntBASIC12.9□□□□□ -0.34
GCM1Q9NP62 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 ACTBP8-201ENST00000403258 1108 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms