Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 AC026748.1-201ENST00000624349 3251 ntBASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 KRT8P14-201ENST00000414254 1442 ntBASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 AC134915.1-201ENST00000426461 574 ntBASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 AC093726.1-201ENST00000608064 963 ntBASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 PRSS30P-206ENST00000641773 873 ntBASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NEUROD4Q9HD90 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 SLC7A15P-201ENST00000424028 1363 ntBASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 C1QBPP1-201ENST00000400117 770 ntBASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms