Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AC113367.3-201ENST00000508316 1912 ntBASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AC093525.8-201ENST00000624099 1342 ntBASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AC092580.3-201ENST00000430932 139 ntBASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 FAM86GP-201ENST00000448322 971 ntBASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AC097493.3-201ENST00000509725 367 ntBASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AL590560.3-201ENST00000623350 461 ntBASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 NUS1P3-201ENST00000423502 862 ntBASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 AC241585.1-201ENST00000433527 519 ntBASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 AC009477.1-201ENST00000452936 217 ntBASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J2Q9GZM3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms