Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 AC134915.1-201ENST00000426461 574 ntBASIC13.9□□□□□ -0.18
TRIM2Q9C040 HLA-K-203ENST00000430151 1046 ntBASIC13.9□□□□□ -0.18
TRIM2Q9C040 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 AC055876.2-201ENST00000531834 546 ntBASIC13.9□□□□□ -0.18
TRIM2Q9C040 AL596325.1-201ENST00000563991 1082 ntBASIC13.9□□□□□ -0.18
TRIM2Q9C040 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 BX539320.1-201ENST00000623759 877 ntBASIC13.9□□□□□ -0.18
TRIM2Q9C040 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM2Q9C040 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRIM2Q9C040 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
TRIM2Q9C040 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.19
TRIM2Q9C040 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRIM2Q9C040 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 RN7SL692P-201ENST00000464677 288 ntBASIC13.89□□□□□ -0.19
TRIM2Q9C040 CR383656.12-201ENST00000549567 513 ntBASIC13.89□□□□□ -0.19
TRIM2Q9C040 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 AC004790.1-201ENST00000612686 536 ntBASIC13.89□□□□□ -0.19
TRIM2Q9C040 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.89□□□□□ -0.19
TRIM2Q9C040 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 MTHFR-210ENST00000641407 2387 ntBASIC13.89□□□□□ -0.19
TRIM2Q9C040 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM2Q9C040 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM2Q9C040 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 AC005089.1-201ENST00000619486 2241 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 INTS4P2-202ENST00000614726 2019 ntBASIC13.88□□□□□ -0.19
TRIM2Q9C040 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRIM2Q9C040 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM2Q9C040 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms