Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 CD8B2-202ENST00000417670 633 ntBASIC16.59■□□□□ 0.25
TRIM6Q9C030 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 ACTBP11-201ENST00000436287 1126 ntBASIC16.59■□□□□ 0.25
TRIM6Q9C030 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 DUX4L45-201ENST00000566406 1057 ntBASIC16.59■□□□□ 0.25
TRIM6Q9C030 RN7SL560P-201ENST00000577943 264 ntBASIC16.59■□□□□ 0.25
TRIM6Q9C030 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM6Q9C030 AC055811.4-201ENST00000624039 1754 ntBASIC16.59■□□□□ 0.25
TRIM6Q9C030 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM6Q9C030 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM6Q9C030 REXO1L5P-201ENST00000622260 2098 ntBASIC16.58■□□□□ 0.25
TRIM6Q9C030 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM6Q9C030 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM6Q9C030 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM6Q9C030 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM6Q9C030 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM6Q9C030 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRIM6Q9C030 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM6Q9C030 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AC026748.1-201ENST00000624349 3251 ntBASIC16.58■□□□□ 0.24
TRIM6Q9C030 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AC104457.1-201ENST00000401024 814 ntBASIC16.58■□□□□ 0.24
TRIM6Q9C030 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 AL603764.1-201ENST00000636452 321 ntBASIC16.58■□□□□ 0.24
TRIM6Q9C030 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM6Q9C030 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRIM6Q9C030 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM6Q9C030 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM6Q9C030 MIR1908-201ENST00000410394 80 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms