Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC17.3■□□□□ 0.36
ARID3AQ99856 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ARID3AQ99856 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ARID3AQ99856 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
ARID3AQ99856 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.29■□□□□ 0.36
ARID3AQ99856 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ARID3AQ99856 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC17.29■□□□□ 0.36
ARID3AQ99856 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ARID3AQ99856 KRT18P28-201ENST00000453838 1332 ntBASIC17.29■□□□□ 0.36
ARID3AQ99856 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ARID3AQ99856 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ARID3AQ99856 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.29■□□□□ 0.36
ARID3AQ99856 HLA-J-203ENST00000494367 1087 ntBASIC17.29■□□□□ 0.36
ARID3AQ99856 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.29■□□□□ 0.36
ARID3AQ99856 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.29■□□□□ 0.36
ARID3AQ99856 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 MIR6080-201ENST00000617359 66 ntBASIC17.29■□□□□ 0.36
ARID3AQ99856 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 AP001059.3-201ENST00000619053 235 ntBASIC17.29■□□□□ 0.36
ARID3AQ99856 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ARID3AQ99856 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 REXO1L1P-202ENST00000608646 1974 ntBASIC17.29■□□□□ 0.36
ARID3AQ99856 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC17.29■□□□□ 0.36
ARID3AQ99856 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 CICP16-201ENST00000502609 2813 ntBASIC17.29■□□□□ 0.36
ARID3AQ99856 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ARID3AQ99856 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ARID3AQ99856 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ARID3AQ99856 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC17.28■□□□□ 0.36
ARID3AQ99856 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC17.28■□□□□ 0.36
ARID3AQ99856 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ARID3AQ99856 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
ARID3AQ99856 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC17.28■□□□□ 0.36
ARID3AQ99856 BEND3P1-201ENST00000421591 1944 ntBASIC17.28■□□□□ 0.36
ARID3AQ99856 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
ARID3AQ99856 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.28■□□□□ 0.36
ARID3AQ99856 METTL21AP1-201ENST00000438852 635 ntBASIC17.28■□□□□ 0.36
ARID3AQ99856 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.28■□□□□ 0.36
ARID3AQ99856 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.28■□□□□ 0.36
ARID3AQ99856 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.28■□□□□ 0.36
ARID3AQ99856 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.28■□□□□ 0.36
ARID3AQ99856 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC17.28■□□□□ 0.36
ARID3AQ99856 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.28■□□□□ 0.36
ARID3AQ99856 MIR4453-201ENST00000584019 89 ntBASIC17.28■□□□□ 0.36
ARID3AQ99856 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.28■□□□□ 0.36
ARID3AQ99856 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.28■□□□□ 0.36
ARID3AQ99856 AC003101.2-201ENST00000612557 442 ntBASIC17.28■□□□□ 0.36
ARID3AQ99856 AC093028.1-201ENST00000622998 982 ntBASIC17.28■□□□□ 0.36
ARID3AQ99856 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.28■□□□□ 0.36
ARID3AQ99856 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ARID3AQ99856 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
ARID3AQ99856 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.28■□□□□ 0.36
ARID3AQ99856 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ARID3AQ99856 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 SLC9A3P3-201ENST00000457608 2229 ntBASIC17.28■□□□□ 0.36
ARID3AQ99856 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC17.28■□□□□ 0.36
ARID3AQ99856 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.28■□□□□ 0.36
ARID3AQ99856 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARID3AQ99856 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
ARID3AQ99856 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARID3AQ99856 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARID3AQ99856 AC018892.3-201ENST00000623986 2499 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms