Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TRGV9Q99603 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
TRGV9Q99603 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV9Q99603 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 AC100757.3-201ENST00000622361 1406 ntBASIC11.77□□□□□ -0.53
TRGV9Q99603 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 CLK3P2-201ENST00000427566 1453 ntBASIC11.76□□□□□ -0.53
TRGV9Q99603 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
TRGV9Q99603 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
TRGV9Q99603 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.76□□□□□ -0.53
TRGV9Q99603 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.76□□□□□ -0.53
TRGV9Q99603 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
TRGV9Q99603 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.76□□□□□ -0.53
TRGV9Q99603 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 AP000347.1-202ENST00000435868 847 ntBASIC11.76□□□□□ -0.53
TRGV9Q99603 AC097493.3-201ENST00000509725 367 ntBASIC11.76□□□□□ -0.53
TRGV9Q99603 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.76□□□□□ -0.53
TRGV9Q99603 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.76□□□□□ -0.53
TRGV9Q99603 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.76□□□□□ -0.53
TRGV9Q99603 AC107373.2-201ENST00000607735 490 ntBASIC11.76□□□□□ -0.53
TRGV9Q99603 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 AC104581.4-201ENST00000623126 3052 ntBASIC11.76□□□□□ -0.53
TRGV9Q99603 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRGV9Q99603 KRT8P22-201ENST00000562317 1415 ntBASIC11.76□□□□□ -0.53
TRGV9Q99603 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV9Q99603 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV9Q99603 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
TRGV9Q99603 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.75□□□□□ -0.53
TRGV9Q99603 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRGV9Q99603 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms