Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.07■□□□□ 0.16
YME1L1Q96TA2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YME1L1Q96TA2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YME1L1Q96TA2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YME1L1Q96TA2 LINC00554-201ENST00000564841 3011 ntBASIC16.07■□□□□ 0.16
YME1L1Q96TA2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YME1L1Q96TA2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AL359258.3-201ENST00000622910 2331 ntBASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AC136759.1-202ENST00000530858 2194 ntBASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 KRT8P21-201ENST00000430398 1491 ntBASIC16.06■□□□□ 0.16
YME1L1Q96TA2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AC114501.1-201ENST00000445949 172 ntBASIC16.06■□□□□ 0.16
YME1L1Q96TA2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AC135983.4-201ENST00000564116 1262 ntBASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 MIR6720-201ENST00000611664 98 ntBASIC16.06■□□□□ 0.16
YME1L1Q96TA2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 HLA-C-210ENST00000640219 976 ntBASIC16.06■□□□□ 0.16
YME1L1Q96TA2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YME1L1Q96TA2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AL138725.1-201ENST00000407347 1314 ntBASIC16.05■□□□□ 0.16
YME1L1Q96TA2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 RPSAP31-201ENST00000416648 895 ntBASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC078875.1-201ENST00000431907 724 ntBASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC087045.2-201ENST00000606279 1003 ntBASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC092171.5-201ENST00000608012 942 ntBASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC007718.1-201ENST00000621078 280 ntBASIC16.05■□□□□ 0.16
YME1L1Q96TA2 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.05■□□□□ 0.16
YME1L1Q96TA2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms