Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 MST1P2-201ENST00000457982 2291 ntBASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3IL1Q8TBN0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 AC005252.3-201ENST00000623855 2258 ntBASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 UXT-AS1-201ENST00000590504 1525 ntBASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 AC074338.1-201ENST00000416825 156 ntBASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 FAM58CP-201ENST00000435741 640 ntBASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 AC073957.3-201ENST00000609998 6758 ntBASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3IL1Q8TBN0 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RAB3IL1Q8TBN0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 Z97205.2-201ENST00000564697 1639 ntBASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 AC010327.4-202ENST00000591484 748 ntBASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RAB3IL1Q8TBN0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms