Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 AP002414.2-201ENST00000591780 3365 ntBASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 FLJ16779-201ENST00000612722 7638 ntBASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 AC010141.1-201ENST00000411585 623 ntBASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 FAM58BP-201ENST00000439056 645 ntBASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 KLF2P1-201ENST00000447438 1042 ntBASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TMEFF1Q8IYR6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 NOC2LP1-201ENST00000450578 752 ntBASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 HLA-J-204ENST00000495278 958 ntBASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AC009779.1-201ENST00000551138 283 ntBASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AC242376.1-201ENST00000559033 726 ntBASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AC103691.2-201ENST00000618824 433 ntBASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 AC244394.1-201ENST00000435000 1665 ntBASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 MBLAC2-202ENST00000514906 1936 ntBASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms