Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF440Q8IYI8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ZNF440Q8IYI8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF440Q8IYI8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF440Q8IYI8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF440Q8IYI8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF440Q8IYI8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF440Q8IYI8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
ZNF440Q8IYI8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF440Q8IYI8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.77□□□□□ -0.2
ZNF440Q8IYI8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF440Q8IYI8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF440Q8IYI8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF440Q8IYI8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF440Q8IYI8 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 EIF3FP3-201ENST00000434851 1086 ntBASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
ZNF440Q8IYI8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 AC093433.1-201ENST00000458048 571 ntBASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 AC027307.3-201ENST00000594262 1100 ntBASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 INTS4P1-203ENST00000641008 3683 ntBASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF440Q8IYI8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF440Q8IYI8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF440Q8IYI8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
ZNF440Q8IYI8 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ZNF440Q8IYI8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF440Q8IYI8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF440Q8IYI8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF440Q8IYI8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF440Q8IYI8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF440Q8IYI8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms