Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 AC072061.1-201ENST00000569710 2234 ntBASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD2Q8IV50 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 HNRNPUP1-201ENST00000554987 333 ntBASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 AC096734.2-201ENST00000562054 433 ntBASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 AL138918.1-201ENST00000568306 659 ntBASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD2Q8IV50 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 RPS2P28-201ENST00000314255 741 ntBASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 RPS8P6-201ENST00000426177 609 ntBASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 HCG4B-203ENST00000450128 991 ntBASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 FAM197Y8-203ENST00000450145 560 ntBASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms