Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 AL390755.1-201ENST00000623716 2027 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 AL589987.1-201ENST00000453380 819 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 RN7SL399P-201ENST00000471648 279 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 AC104596.2-201ENST00000512793 793 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 AC104794.3-201ENST00000566840 1248 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 LILRP1-201ENST00000444199 1370 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 AC015656.1-201ENST00000624209 3578 ntBASIC13.8□□□□□ -0.2
HIST3H2AQ7L7L0 AC232323.1-201ENST00000540724 2099 ntBASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 REXO1L5P-201ENST00000622260 2098 ntBASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 SPDYE19P-201ENST00000338590 713 ntBASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 SPDYE18-201ENST00000510091 1050 ntBASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 AL049840.4-201ENST00000602422 811 ntBASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 AL360270.3-201ENST00000609118 1348 ntBASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2AQ7L7L0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms