Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 AL607033.1-201ENST00000623900 1599 ntBASIC11.42□□□□□ -0.58
MRPL54Q6P161 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 CXCL1P1-201ENST00000502804 216 ntBASIC11.42□□□□□ -0.58
MRPL54Q6P161 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 OR7E47P-204ENST00000575924 449 ntBASIC11.42□□□□□ -0.58
MRPL54Q6P161 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 AC025062.2-201ENST00000605477 670 ntBASIC11.42□□□□□ -0.58
MRPL54Q6P161 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 AL355877.3-201ENST00000622820 899 ntBASIC11.42□□□□□ -0.58
MRPL54Q6P161 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 REXO1L4P-201ENST00000605109 1937 ntBASIC11.42□□□□□ -0.58
MRPL54Q6P161 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL54Q6P161 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.42□□□□□ -0.58
MRPL54Q6P161 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 PTPRVP-205ENST00000641549 5067 ntBASIC11.41□□□□□ -0.58
MRPL54Q6P161 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 AC073869.1-201ENST00000415574 2762 ntBASIC11.41□□□□□ -0.58
MRPL54Q6P161 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL54Q6P161 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL54Q6P161 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms