Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 AC004890.2-204ENST00000481968 304 ntBASIC14.06□□□□□ -0.16
REEP3Q6NUK4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 TPRX2P-201ENST00000535362 881 ntBASIC14.06□□□□□ -0.16
REEP3Q6NUK4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 AL662799.1-202ENST00000614205 422 ntBASIC14.06□□□□□ -0.16
REEP3Q6NUK4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 PRSS30P-206ENST00000641773 873 ntBASIC14.06□□□□□ -0.16
REEP3Q6NUK4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
REEP3Q6NUK4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 MEP1AP4-201ENST00000423244 1087 ntBASIC14.05□□□□□ -0.16
REEP3Q6NUK4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 BX539320.1-201ENST00000623759 877 ntBASIC14.05□□□□□ -0.16
REEP3Q6NUK4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 KRT18P28-201ENST00000453838 1332 ntBASIC14.05□□□□□ -0.16
REEP3Q6NUK4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
REEP3Q6NUK4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms