Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 AC012313.10-201ENST00000623509 926 ntBASIC14.22□□□□□ -0.13
LPCAT4Q643R3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 AGAP10P-201ENST00000454844 2418 ntBASIC14.22□□□□□ -0.13
LPCAT4Q643R3 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 LINC01711-201ENST00000598340 967 ntBASIC14.21□□□□□ -0.13
LPCAT4Q643R3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 AC010507.1-201ENST00000633895 436 ntBASIC14.21□□□□□ -0.13
LPCAT4Q643R3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LPCAT4Q643R3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 AL445209.1-201ENST00000607269 3491 ntBASIC14.21□□□□□ -0.14
LPCAT4Q643R3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
LPCAT4Q643R3 AC072061.1-201ENST00000569710 2234 ntBASIC14.21□□□□□ -0.14
LPCAT4Q643R3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.2□□□□□ -0.14
LPCAT4Q643R3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms