Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 AL645937.2-201ENST00000396808 931 ntBASIC14.54□□□□□ -0.08
HMGCS1Q01581 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 MEP1AP4-201ENST00000423244 1087 ntBASIC14.54□□□□□ -0.08
HMGCS1Q01581 UGT1A2P-201ENST00000454886 866 ntBASIC14.54□□□□□ -0.08
HMGCS1Q01581 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 RPL13AP25-201ENST00000484130 612 ntBASIC14.54□□□□□ -0.08
HMGCS1Q01581 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 SPDYE22P-201ENST00000582158 798 ntBASIC14.54□□□□□ -0.08
HMGCS1Q01581 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 AC093813.1-201ENST00000605066 256 ntBASIC14.54□□□□□ -0.08
HMGCS1Q01581 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 SBF1P1-201ENST00000444527 5631 ntBASIC14.54□□□□□ -0.08
HMGCS1Q01581 INTS4P2-202ENST00000614726 2019 ntBASIC14.54□□□□□ -0.08
HMGCS1Q01581 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 AC120045.2-201ENST00000567334 178 ntBASIC14.53□□□□□ -0.08
HMGCS1Q01581 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 BX539320.1-201ENST00000623759 877 ntBASIC14.53□□□□□ -0.08
HMGCS1Q01581 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCS1Q01581 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGCS1Q01581 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCS1Q01581 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCS1Q01581 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCS1Q01581 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCS1Q01581 KRT8P14-201ENST00000414254 1442 ntBASIC14.52□□□□□ -0.08
HMGCS1Q01581 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms