Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.23□□□□□ -0.13
RAE1P78406 AC131206.1-201ENST00000538078 1211 ntBASIC14.23□□□□□ -0.13
RAE1P78406 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.23□□□□□ -0.13
RAE1P78406 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.23□□□□□ -0.13
RAE1P78406 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 AC092364.2-202ENST00000597012 1073 ntBASIC14.23□□□□□ -0.13
RAE1P78406 AC145423.3-201ENST00000615987 467 ntBASIC14.23□□□□□ -0.13
RAE1P78406 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.23□□□□□ -0.13
RAE1P78406 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
RAE1P78406 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAE1P78406 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.23□□□□□ -0.13
RAE1P78406 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.22□□□□□ -0.13
RAE1P78406 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RAE1P78406 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAE1P78406 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAE1P78406 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAE1P78406 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAE1P78406 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAE1P78406 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.22□□□□□ -0.13
RAE1P78406 BAATP1-201ENST00000412284 1225 ntBASIC14.22□□□□□ -0.13
RAE1P78406 ACTG1P3-201ENST00000431775 1114 ntBASIC14.22□□□□□ -0.13
RAE1P78406 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.22□□□□□ -0.13
RAE1P78406 MIR5189-201ENST00000577370 114 ntBASIC14.22□□□□□ -0.13
RAE1P78406 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.22□□□□□ -0.13
RAE1P78406 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 INE2-201ENST00000630399 1874 ntBASIC14.22□□□□□ -0.13
RAE1P78406 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAE1P78406 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.22□□□□□ -0.13
RAE1P78406 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.22□□□□□ -0.13
RAE1P78406 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.22□□□□□ -0.13
RAE1P78406 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
RAE1P78406 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.22□□□□□ -0.13
RAE1P78406 AC136759.1-202ENST00000530858 2194 ntBASIC14.22□□□□□ -0.13
RAE1P78406 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAE1P78406 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.22□□□□□ -0.13
RAE1P78406 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAE1P78406 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.21□□□□□ -0.13
RAE1P78406 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAE1P78406 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 AC134312.5-201ENST00000568031 1313 ntBASIC14.21□□□□□ -0.13
RAE1P78406 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.21□□□□□ -0.13
RAE1P78406 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.21□□□□□ -0.13
RAE1P78406 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 AL138709.1-201ENST00000614840 1693 ntBASIC14.21□□□□□ -0.13
RAE1P78406 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 AC092135.3-201ENST00000624151 1846 ntBASIC14.21□□□□□ -0.13
RAE1P78406 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.21□□□□□ -0.13
RAE1P78406 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 MESTP3-201ENST00000503460 968 ntBASIC14.21□□□□□ -0.13
RAE1P78406 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.21□□□□□ -0.13
RAE1P78406 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 AC010319.3-201ENST00000597028 470 ntBASIC14.21□□□□□ -0.13
RAE1P78406 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.21□□□□□ -0.13
RAE1P78406 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.21□□□□□ -0.13
RAE1P78406 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAE1P78406 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RAE1P78406 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
RAE1P78406 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.21□□□□□ -0.14
RAE1P78406 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms