Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.22□□□□□ -0.13
RPS3AP61247 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.22□□□□□ -0.13
RPS3AP61247 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.22□□□□□ -0.13
RPS3AP61247 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
RPS3AP61247 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 SPDYE19P-201ENST00000338590 713 ntBASIC14.22□□□□□ -0.13
RPS3AP61247 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.22□□□□□ -0.13
RPS3AP61247 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 MIR661-201ENST00000384842 89 ntBASIC14.22□□□□□ -0.13
RPS3AP61247 DFFBP1-201ENST00000433250 979 ntBASIC14.22□□□□□ -0.13
RPS3AP61247 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.22□□□□□ -0.13
RPS3AP61247 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.22□□□□□ -0.13
RPS3AP61247 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.22□□□□□ -0.13
RPS3AP61247 TPRX2P-201ENST00000535362 881 ntBASIC14.22□□□□□ -0.13
RPS3AP61247 AC092337.1-201ENST00000568699 1129 ntBASIC14.22□□□□□ -0.13
RPS3AP61247 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.22□□□□□ -0.13
RPS3AP61247 LINC02084-201ENST00000606069 1096 ntBASIC14.22□□□□□ -0.13
RPS3AP61247 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.22□□□□□ -0.13
RPS3AP61247 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.22□□□□□ -0.13
RPS3AP61247 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.22□□□□□ -0.13
RPS3AP61247 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 AC089987.1-201ENST00000551654 2209 ntBASIC14.22□□□□□ -0.13
RPS3AP61247 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RPS3AP61247 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RPS3AP61247 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 AC073869.1-201ENST00000415574 2762 ntBASIC14.22□□□□□ -0.13
RPS3AP61247 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.22□□□□□ -0.13
RPS3AP61247 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RPS3AP61247 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.21□□□□□ -0.13
RPS3AP61247 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
RPS3AP61247 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RPS3AP61247 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RPS3AP61247 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 AC007541.1-201ENST00000570282 1469 ntBASIC14.21□□□□□ -0.13
RPS3AP61247 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.21□□□□□ -0.13
RPS3AP61247 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.21□□□□□ -0.13
RPS3AP61247 AC136604.1-201ENST00000418535 575 ntBASIC14.21□□□□□ -0.13
RPS3AP61247 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.21□□□□□ -0.13
RPS3AP61247 AL353779.1-201ENST00000434793 351 ntBASIC14.21□□□□□ -0.13
RPS3AP61247 TARDBPP1-201ENST00000442013 1203 ntBASIC14.21□□□□□ -0.13
RPS3AP61247 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.21□□□□□ -0.13
RPS3AP61247 MEIS3P1-201ENST00000495167 958 ntBASIC14.21□□□□□ -0.13
RPS3AP61247 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.21□□□□□ -0.13
RPS3AP61247 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.21□□□□□ -0.13
RPS3AP61247 AC055876.2-201ENST00000531834 546 ntBASIC14.21□□□□□ -0.13
RPS3AP61247 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.21□□□□□ -0.13
RPS3AP61247 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.21□□□□□ -0.13
RPS3AP61247 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
RPS3AP61247 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.21□□□□□ -0.13
RPS3AP61247 AL132655.2-201ENST00000596276 594 ntBASIC14.21□□□□□ -0.13
RPS3AP61247 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPS3AP61247 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RPS3AP61247 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.21□□□□□ -0.13
RPS3AP61247 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
RPS3AP61247 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
RPS3AP61247 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms