Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CXCR4P61073 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CXCR4P61073 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.74□□□□□ -0.21
CXCR4P61073 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 CEND1P1-201ENST00000451006 455 ntBASIC13.74□□□□□ -0.21
CXCR4P61073 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.74□□□□□ -0.21
CXCR4P61073 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CXCR4P61073 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.74□□□□□ -0.21
CXCR4P61073 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.74□□□□□ -0.21
CXCR4P61073 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.74□□□□□ -0.21
CXCR4P61073 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.74□□□□□ -0.21
CXCR4P61073 RN7SL828P-201ENST00000607615 303 ntBASIC13.74□□□□□ -0.21
CXCR4P61073 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 ELL2P1-201ENST00000413990 1906 ntBASIC13.74□□□□□ -0.21
CXCR4P61073 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CXCR4P61073 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CXCR4P61073 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCR4P61073 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.73□□□□□ -0.21
CXCR4P61073 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.73□□□□□ -0.21
CXCR4P61073 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 FAM58DP-201ENST00000428076 619 ntBASIC13.73□□□□□ -0.21
CXCR4P61073 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.73□□□□□ -0.21
CXCR4P61073 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
CXCR4P61073 PGAM5P1-201ENST00000518923 814 ntBASIC13.73□□□□□ -0.21
CXCR4P61073 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.73□□□□□ -0.21
CXCR4P61073 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.73□□□□□ -0.21
CXCR4P61073 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.73□□□□□ -0.21
CXCR4P61073 SAMD11P1-201ENST00000571429 661 ntBASIC13.73□□□□□ -0.21
CXCR4P61073 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
CXCR4P61073 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 AL121894.2-201ENST00000602977 491 ntBASIC13.73□□□□□ -0.21
CXCR4P61073 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.73□□□□□ -0.21
CXCR4P61073 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.73□□□□□ -0.21
CXCR4P61073 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CXCR4P61073 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.73□□□□□ -0.21
CXCR4P61073 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCR4P61073 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CXCR4P61073 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms