Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.16□□□□□ -0.3
CLDN12P56749 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CLDN12P56749 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN12P56749 AL645728.2-202ENST00000641679 227 ntBASIC13.16□□□□□ -0.3
CLDN12P56749 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN12P56749 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN12P56749 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN12P56749 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN12P56749 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN12P56749 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN12P56749 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CLDN12P56749 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLDN12P56749 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLDN12P56749 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CLDN12P56749 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN12P56749 AC130686.1-201ENST00000622936 2466 ntBASIC13.16□□□□□ -0.3
CLDN12P56749 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN12P56749 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN12P56749 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN12P56749 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN12P56749 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN12P56749 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLDN12P56749 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLDN12P56749 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLDN12P56749 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLDN12P56749 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLDN12P56749 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 AL590627.1-203ENST00000421194 1026 ntBASIC13.15□□□□□ -0.3
CLDN12P56749 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDN12P56749 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.15□□□□□ -0.3
CLDN12P56749 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.3
CLDN12P56749 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 FAM197Y3-203ENST00000618346 717 ntBASIC13.15□□□□□ -0.3
CLDN12P56749 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN12P56749 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 AC105206.1-202ENST00000314927 2368 ntBASIC13.15□□□□□ -0.3
CLDN12P56749 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLDN12P56749 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CLDN12P56749 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN12P56749 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN12P56749 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN12P56749 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CLDN12P56749 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CLDN12P56749 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
CLDN12P56749 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CLDN12P56749 AC012617.1-204ENST00000586340 2305 ntBASIC13.14□□□□□ -0.31
CLDN12P56749 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.14□□□□□ -0.31
CLDN12P56749 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms