Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 AC084364.1-201ENST00000551967 1556 ntBASIC14.13□□□□□ -0.15
CDH15P55291 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 AC020658.7-201ENST00000624274 2442 ntBASIC14.13□□□□□ -0.15
CDH15P55291 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDH15P55291 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDH15P55291 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH15P55291 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH15P55291 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH15P55291 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 AC109635.5-201ENST00000533593 962 ntBASIC14.13□□□□□ -0.15
CDH15P55291 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.13□□□□□ -0.15
CDH15P55291 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH15P55291 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH15P55291 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDH15P55291 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.13□□□□□ -0.15
CDH15P55291 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH15P55291 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CDH15P55291 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH15P55291 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH15P55291 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH15P55291 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
CDH15P55291 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH15P55291 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH15P55291 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 AC004241.5-201ENST00000623870 2448 ntBASIC14.12□□□□□ -0.15
CDH15P55291 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 AL139400.1-201ENST00000366220 510 ntBASIC14.12□□□□□ -0.15
CDH15P55291 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH15P55291 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.12□□□□□ -0.15
CDH15P55291 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH15P55291 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH15P55291 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.12□□□□□ -0.15
CDH15P55291 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH15P55291 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH15P55291 AC004449.1-201ENST00000564240 433 ntBASIC14.12□□□□□ -0.15
CDH15P55291 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.12□□□□□ -0.15
CDH15P55291 MIR3197-201ENST00000582241 73 ntBASIC14.12□□□□□ -0.15
CDH15P55291 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 AC022145.2-201ENST00000598203 171 ntBASIC14.12□□□□□ -0.15
CDH15P55291 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH15P55291 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDH15P55291 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH15P55291 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms