Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH6P55285 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 AC026748.1-201ENST00000624349 3251 ntBASIC15.69■□□□□ 0.1
CDH6P55285 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDH6P55285 LRRC59-203ENST00000576448 1531 ntBASIC15.68■□□□□ 0.1
CDH6P55285 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH6P55285 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH6P55285 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH6P55285 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH6P55285 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH6P55285 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH6P55285 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH6P55285 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
CDH6P55285 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.68■□□□□ 0.1
CDH6P55285 AP001063.1-201ENST00000568332 529 ntBASIC15.68■□□□□ 0.1
CDH6P55285 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH6P55285 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH6P55285 AC027307.3-201ENST00000594262 1100 ntBASIC15.68■□□□□ 0.1
CDH6P55285 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.68■□□□□ 0.1
CDH6P55285 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH6P55285 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 SNX18-202ENST00000343017 3140 ntBASIC15.68■□□□□ 0.1
CDH6P55285 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CDH6P55285 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH6P55285 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH6P55285 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH6P55285 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDH6P55285 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CDH6P55285 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH6P55285 DGCR5-201ENST00000399539 862 ntBASIC15.67■□□□□ 0.1
CDH6P55285 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CDH6P55285 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH6P55285 EIF3FP3-201ENST00000434851 1086 ntBASIC15.67■□□□□ 0.1
CDH6P55285 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 AC026434.2-201ENST00000506094 1078 ntBASIC15.67■□□□□ 0.1
CDH6P55285 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH6P55285 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH6P55285 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDH6P55285 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CDH6P55285 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 AL033527.5-201ENST00000641382 801 ntBASIC15.67■□□□□ 0.1
CDH6P55285 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDH6P55285 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH6P55285 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH6P55285 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH6P55285 AC007326.2-201ENST00000624224 7579 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms