Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
NR1H2P55055 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.38□□□□□ -0.11
NR1H2P55055 AC023090.2-201ENST00000625182 2110 ntBASIC14.38□□□□□ -0.11
NR1H2P55055 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NR1H2P55055 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.38□□□□□ -0.11
NR1H2P55055 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.38□□□□□ -0.11
NR1H2P55055 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.38□□□□□ -0.11
NR1H2P55055 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.38□□□□□ -0.11
NR1H2P55055 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.38□□□□□ -0.11
NR1H2P55055 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.38□□□□□ -0.11
NR1H2P55055 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.38□□□□□ -0.11
NR1H2P55055 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.38□□□□□ -0.11
NR1H2P55055 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.38□□□□□ -0.11
NR1H2P55055 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.38□□□□□ -0.11
NR1H2P55055 AC018529.2-202ENST00000611482 3087 ntBASIC14.38□□□□□ -0.11
NR1H2P55055 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.38□□□□□ -0.11
NR1H2P55055 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
NR1H2P55055 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR1H2P55055 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NR1H2P55055 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.38□□□□□ -0.11
NR1H2P55055 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
NR1H2P55055 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.37□□□□□ -0.11
NR1H2P55055 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 AL512638.1-201ENST00000457493 794 ntBASIC14.37□□□□□ -0.11
NR1H2P55055 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.37□□□□□ -0.11
NR1H2P55055 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.37□□□□□ -0.11
NR1H2P55055 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 AL023775.1-201ENST00000454907 1746 ntBASIC14.37□□□□□ -0.11
NR1H2P55055 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.37□□□□□ -0.11
NR1H2P55055 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR1H2P55055 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NR1H2P55055 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms