Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.45□□□□□ -0.26
SRP9P49458 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.45□□□□□ -0.26
SRP9P49458 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.45□□□□□ -0.26
SRP9P49458 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.44□□□□□ -0.26
SRP9P49458 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 AC152010.1-201ENST00000415779 2006 ntBASIC13.44□□□□□ -0.26
SRP9P49458 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SRP9P49458 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.44□□□□□ -0.26
SRP9P49458 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.44□□□□□ -0.26
SRP9P49458 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.44□□□□□ -0.26
SRP9P49458 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SRP9P49458 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 CICP11-201ENST00000434745 2827 ntBASIC13.44□□□□□ -0.26
SRP9P49458 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.44□□□□□ -0.26
SRP9P49458 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.44□□□□□ -0.26
SRP9P49458 AC009477.1-201ENST00000452936 217 ntBASIC13.44□□□□□ -0.26
SRP9P49458 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.44□□□□□ -0.26
SRP9P49458 TIMM17BP1-201ENST00000545713 516 ntBASIC13.44□□□□□ -0.26
SRP9P49458 HNRNPUP1-201ENST00000554987 333 ntBASIC13.44□□□□□ -0.26
SRP9P49458 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.44□□□□□ -0.26
SRP9P49458 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.44□□□□□ -0.26
SRP9P49458 AC025048.3-201ENST00000590609 569 ntBASIC13.44□□□□□ -0.26
SRP9P49458 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.44□□□□□ -0.26
SRP9P49458 AC005702.4-201ENST00000618393 416 ntBASIC13.44□□□□□ -0.26
SRP9P49458 AL109936.8-201ENST00000641772 604 ntBASIC13.44□□□□□ -0.26
SRP9P49458 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SRP9P49458 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.44□□□□□ -0.26
SRP9P49458 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.44□□□□□ -0.26
SRP9P49458 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.44□□□□□ -0.26
SRP9P49458 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SRP9P49458 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SRP9P49458 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms