Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 LINC01230-201ENST00000625222 3017 ntBASIC10.23□□□□□ -0.77
CXCL5P42830 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 REXO1L4P-201ENST00000605109 1937 ntBASIC10.23□□□□□ -0.77
CXCL5P42830 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 YBX2P1-201ENST00000394192 760 ntBASIC10.23□□□□□ -0.77
CXCL5P42830 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
CXCL5P42830 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.23□□□□□ -0.77
CXCL5P42830 AL592309.1-201ENST00000443127 649 ntBASIC10.23□□□□□ -0.77
CXCL5P42830 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 TPT1P11-201ENST00000458482 498 ntBASIC10.23□□□□□ -0.77
CXCL5P42830 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 KRT18P43-201ENST00000469825 1281 ntBASIC10.23□□□□□ -0.77
CXCL5P42830 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.23□□□□□ -0.77
CXCL5P42830 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC10.23□□□□□ -0.77
CXCL5P42830 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.23□□□□□ -0.77
CXCL5P42830 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
CXCL5P42830 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.23□□□□□ -0.77
CXCL5P42830 AC018529.1-201ENST00000613063 361 ntBASIC10.23□□□□□ -0.77
CXCL5P42830 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CXCL5P42830 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.23□□□□□ -0.77
CXCL5P42830 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.23□□□□□ -0.77
CXCL5P42830 AC018442.1-201ENST00000421439 2061 ntBASIC10.22□□□□□ -0.77
CXCL5P42830 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.22□□□□□ -0.77
CXCL5P42830 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
CXCL5P42830 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
CXCL5P42830 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
CXCL5P42830 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
CXCL5P42830 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CXCL5P42830 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
CXCL5P42830 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CXCL5P42830 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CXCL5P42830 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CXCL5P42830 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
CXCL5P42830 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CXCL5P42830 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC10.22□□□□□ -0.77
CXCL5P42830 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CXCL5P42830 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CXCL5P42830 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms