Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 AHCYP4-201ENST00000419201 1315 ntBASIC18.3■□□□□ 0.52
PDE6BP35913 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.3■□□□□ 0.52
PDE6BP35913 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE6BP35913 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.3■□□□□ 0.52
PDE6BP35913 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.3■□□□□ 0.52
PDE6BP35913 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PDE6BP35913 RNA5SP359-201ENST00000364838 113 ntBASIC18.3■□□□□ 0.52
PDE6BP35913 KRT18P36-201ENST00000411618 1276 ntBASIC18.3■□□□□ 0.52
PDE6BP35913 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.3■□□□□ 0.52
PDE6BP35913 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.3■□□□□ 0.52
PDE6BP35913 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE6BP35913 NUDT4P2-201ENST00000578341 546 ntBASIC18.3■□□□□ 0.52
PDE6BP35913 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDE6BP35913 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 AC107464.3-201ENST00000609172 737 ntBASIC18.3■□□□□ 0.52
PDE6BP35913 AC105137.3-201ENST00000617588 984 ntBASIC18.3■□□□□ 0.52
PDE6BP35913 AP001184.1-201ENST00000637936 376 ntBASIC18.3■□□□□ 0.52
PDE6BP35913 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDE6BP35913 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PDE6BP35913 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PDE6BP35913 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6BP35913 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE6BP35913 HYMAI-201ENST00000635591 3347 ntBASIC18.29■□□□□ 0.52
PDE6BP35913 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PDE6BP35913 AC023090.2-201ENST00000625182 2110 ntBASIC18.29■□□□□ 0.52
PDE6BP35913 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
PDE6BP35913 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.29■□□□□ 0.52
PDE6BP35913 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE6BP35913 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PDE6BP35913 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE6BP35913 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE6BP35913 HIST2H2BA-201ENST00000412169 381 ntBASIC18.29■□□□□ 0.52
PDE6BP35913 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE6BP35913 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE6BP35913 TMCO5B-205ENST00000530020 894 ntBASIC18.29■□□□□ 0.52
PDE6BP35913 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PDE6BP35913 AC073911.3-201ENST00000624401 631 ntBASIC18.29■□□□□ 0.52
PDE6BP35913 AC005618.3-201ENST00000624928 458 ntBASIC18.29■□□□□ 0.52
PDE6BP35913 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
PDE6BP35913 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PDE6BP35913 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
PDE6BP35913 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE6BP35913 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 AC090616.6-203ENST00000579186 1945 ntBASIC18.29■□□□□ 0.52
PDE6BP35913 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDE6BP35913 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6BP35913 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6BP35913 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.28■□□□□ 0.52
PDE6BP35913 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.28■□□□□ 0.52
PDE6BP35913 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.28■□□□□ 0.52
PDE6BP35913 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6BP35913 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms