Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
CTNNA1P35221 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.96■□□□□ 0.15
CTNNA1P35221 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
CTNNA1P35221 AC004449.1-201ENST00000564240 433 ntBASIC15.96■□□□□ 0.15
CTNNA1P35221 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
CTNNA1P35221 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTNNA1P35221 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.96■□□□□ 0.15
CTNNA1P35221 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTNNA1P35221 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.96■□□□□ 0.15
CTNNA1P35221 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTNNA1P35221 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.96■□□□□ 0.15
CTNNA1P35221 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.96■□□□□ 0.15
CTNNA1P35221 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CTNNA1P35221 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTNNA1P35221 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTNNA1P35221 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTNNA1P35221 BTBD7P1-201ENST00000447253 1453 ntBASIC15.96■□□□□ 0.14
CTNNA1P35221 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CTNNA1P35221 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CTNNA1P35221 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CTNNA1P35221 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 AC093525.8-201ENST00000624099 1342 ntBASIC15.95■□□□□ 0.14
CTNNA1P35221 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CTNNA1P35221 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CTNNA1P35221 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.95■□□□□ 0.14
CTNNA1P35221 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
CTNNA1P35221 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.95■□□□□ 0.14
CTNNA1P35221 TREML5P-201ENST00000421694 576 ntBASIC15.95■□□□□ 0.14
CTNNA1P35221 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 MEIS3P1-201ENST00000495167 958 ntBASIC15.95■□□□□ 0.14
CTNNA1P35221 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.95■□□□□ 0.14
CTNNA1P35221 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CTNNA1P35221 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.95■□□□□ 0.14
CTNNA1P35221 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.95■□□□□ 0.14
CTNNA1P35221 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CTNNA1P35221 CLK3P2-201ENST00000427566 1453 ntBASIC15.95■□□□□ 0.14
CTNNA1P35221 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CTNNA1P35221 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTNNA1P35221 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.94■□□□□ 0.14
CTNNA1P35221 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 AC092135.3-201ENST00000624151 1846 ntBASIC15.94■□□□□ 0.14
CTNNA1P35221 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CTNNA1P35221 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.94■□□□□ 0.14
CTNNA1P35221 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.94■□□□□ 0.14
CTNNA1P35221 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CTNNA1P35221 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 HLA-K-203ENST00000430151 1046 ntBASIC15.94■□□□□ 0.14
CTNNA1P35221 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.94■□□□□ 0.14
CTNNA1P35221 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.94■□□□□ 0.14
CTNNA1P35221 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.94■□□□□ 0.14
CTNNA1P35221 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.94■□□□□ 0.14
CTNNA1P35221 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.94■□□□□ 0.14
CTNNA1P35221 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.94■□□□□ 0.14
CTNNA1P35221 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.94■□□□□ 0.14
CTNNA1P35221 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CTNNA1P35221 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CTNNA1P35221 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTNNA1P35221 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.94■□□□□ 0.14
CTNNA1P35221 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms