Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCD3P28288 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
ABCD3P28288 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCD3P28288 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.88□□□□□ -0.19
ABCD3P28288 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 PCDHA3-202ENST00000532566 4594 ntBASIC13.88□□□□□ -0.19
ABCD3P28288 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ABCD3P28288 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.88□□□□□ -0.19
ABCD3P28288 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.88□□□□□ -0.19
ABCD3P28288 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.88□□□□□ -0.19
ABCD3P28288 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ABCD3P28288 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 CD8B2-202ENST00000417670 633 ntBASIC13.88□□□□□ -0.19
ABCD3P28288 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.88□□□□□ -0.19
ABCD3P28288 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 ATP5G2P4-201ENST00000442175 420 ntBASIC13.88□□□□□ -0.19
ABCD3P28288 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.88□□□□□ -0.19
ABCD3P28288 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.88□□□□□ -0.19
ABCD3P28288 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.88□□□□□ -0.19
ABCD3P28288 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.88□□□□□ -0.19
ABCD3P28288 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.88□□□□□ -0.19
ABCD3P28288 MIR6805-201ENST00000615055 62 ntBASIC13.88□□□□□ -0.19
ABCD3P28288 MIR6775-201ENST00000617557 69 ntBASIC13.88□□□□□ -0.19
ABCD3P28288 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
ABCD3P28288 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
ABCD3P28288 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
ABCD3P28288 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCD3P28288 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 AC006001.1-201ENST00000325130 474 ntBASIC13.87□□□□□ -0.19
ABCD3P28288 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.87□□□□□ -0.19
ABCD3P28288 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 AP005482.1-201ENST00000563722 1273 ntBASIC13.87□□□□□ -0.19
ABCD3P28288 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 AC006453.4-201ENST00000636949 1252 ntBASIC13.87□□□□□ -0.19
ABCD3P28288 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms