Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
GDF1P27539 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
GDF1P27539 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.65□□□□□ -0.22
GDF1P27539 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.65□□□□□ -0.23
GDF1P27539 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.64□□□□□ -0.23
GDF1P27539 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDF1P27539 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.64□□□□□ -0.23
GDF1P27539 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.64□□□□□ -0.23
GDF1P27539 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.64□□□□□ -0.23
GDF1P27539 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDF1P27539 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDF1P27539 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.64□□□□□ -0.23
GDF1P27539 FAM86HP-204ENST00000513466 959 ntBASIC13.64□□□□□ -0.23
GDF1P27539 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 C2orf69P2-201ENST00000562032 1123 ntBASIC13.64□□□□□ -0.23
GDF1P27539 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.64□□□□□ -0.23
GDF1P27539 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.64□□□□□ -0.23
GDF1P27539 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.64□□□□□ -0.23
GDF1P27539 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.64□□□□□ -0.23
GDF1P27539 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDF1P27539 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 OR2I1P-210ENST00000642037 4691 ntBASIC13.64□□□□□ -0.23
GDF1P27539 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDF1P27539 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDF1P27539 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GDF1P27539 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.63□□□□□ -0.23
GDF1P27539 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 AL596257.1-201ENST00000641463 2694 ntBASIC13.63□□□□□ -0.23
GDF1P27539 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GDF1P27539 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GDF1P27539 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GDF1P27539 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.63□□□□□ -0.23
GDF1P27539 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.63□□□□□ -0.23
GDF1P27539 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.63□□□□□ -0.23
GDF1P27539 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.63□□□□□ -0.23
GDF1P27539 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.63□□□□□ -0.23
GDF1P27539 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.63□□□□□ -0.23
GDF1P27539 AC073413.1-201ENST00000603927 732 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms