Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.47□□□□□ -0.09
PTX3P26022 AC138969.2-201ENST00000532739 9932 ntBASIC14.47□□□□□ -0.09
PTX3P26022 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTX3P26022 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.47□□□□□ -0.09
PTX3P26022 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTX3P26022 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTX3P26022 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTX3P26022 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PTX3P26022 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.47□□□□□ -0.09
PTX3P26022 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
PTX3P26022 AC023090.2-201ENST00000625182 2110 ntBASIC14.47□□□□□ -0.09
PTX3P26022 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTX3P26022 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PTX3P26022 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTX3P26022 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PTX3P26022 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.47□□□□□ -0.09
PTX3P26022 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTX3P26022 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTX3P26022 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTX3P26022 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PTX3P26022 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 AC007686.3-201ENST00000619017 3487 ntBASIC14.46□□□□□ -0.09
PTX3P26022 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PTX3P26022 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PTX3P26022 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.46□□□□□ -0.09
PTX3P26022 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.46□□□□□ -0.09
PTX3P26022 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PTX3P26022 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
PTX3P26022 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.46□□□□□ -0.09
PTX3P26022 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.46□□□□□ -0.09
PTX3P26022 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.46□□□□□ -0.09
PTX3P26022 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.46□□□□□ -0.09
PTX3P26022 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.46□□□□□ -0.09
PTX3P26022 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.46□□□□□ -0.09
PTX3P26022 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.46□□□□□ -0.09
PTX3P26022 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.46□□□□□ -0.09
PTX3P26022 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.46□□□□□ -0.09
PTX3P26022 CLUHP6-201ENST00000580789 941 ntBASIC14.46□□□□□ -0.09
PTX3P26022 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PTX3P26022 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.46□□□□□ -0.09
PTX3P26022 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.46□□□□□ -0.09
PTX3P26022 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.46□□□□□ -0.09
PTX3P26022 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PTX3P26022 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PTX3P26022 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.46□□□□□ -0.09
PTX3P26022 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PTX3P26022 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PTX3P26022 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.46□□□□□ -0.1
PTX3P26022 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.46□□□□□ -0.1
PTX3P26022 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.45□□□□□ -0.1
PTX3P26022 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
PTX3P26022 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PTX3P26022 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PTX3P26022 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PTX3P26022 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.45□□□□□ -0.1
PTX3P26022 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PTX3P26022 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
PTX3P26022 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.45□□□□□ -0.1
PTX3P26022 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PTX3P26022 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PTX3P26022 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.45□□□□□ -0.1
PTX3P26022 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 DGCR5-201ENST00000399539 862 ntBASIC14.45□□□□□ -0.1
PTX3P26022 ACTBP8-201ENST00000403258 1108 ntBASIC14.45□□□□□ -0.1
PTX3P26022 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 CRB3P1-201ENST00000449338 276 ntBASIC14.45□□□□□ -0.1
PTX3P26022 AC093433.1-201ENST00000458048 571 ntBASIC14.45□□□□□ -0.1
PTX3P26022 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PTX3P26022 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.45□□□□□ -0.1
PTX3P26022 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.45□□□□□ -0.1
PTX3P26022 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTX3P26022 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms