Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.93□□□□□ -0.34
TNFSF4P23510 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.93□□□□□ -0.34
TNFSF4P23510 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.93□□□□□ -0.34
TNFSF4P23510 AC016694.1-201ENST00000434179 700 ntBASIC12.93□□□□□ -0.34
TNFSF4P23510 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.93□□□□□ -0.34
TNFSF4P23510 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.93□□□□□ -0.34
TNFSF4P23510 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.93□□□□□ -0.34
TNFSF4P23510 USP32P1-208ENST00000506594 1164 ntBASIC12.93□□□□□ -0.34
TNFSF4P23510 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.93□□□□□ -0.34
TNFSF4P23510 KRT17P8-201ENST00000540749 863 ntBASIC12.93□□□□□ -0.34
TNFSF4P23510 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.93□□□□□ -0.34
TNFSF4P23510 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.93□□□□□ -0.34
TNFSF4P23510 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.93□□□□□ -0.34
TNFSF4P23510 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.93□□□□□ -0.34
TNFSF4P23510 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.93□□□□□ -0.34
TNFSF4P23510 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TNFSF4P23510 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.93□□□□□ -0.34
TNFSF4P23510 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TNFSF4P23510 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.93□□□□□ -0.34
TNFSF4P23510 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TNFSF4P23510 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.92□□□□□ -0.34
TNFSF4P23510 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TNFSF4P23510 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
TNFSF4P23510 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TNFSF4P23510 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TNFSF4P23510 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TNFSF4P23510 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.92□□□□□ -0.34
TNFSF4P23510 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.92□□□□□ -0.34
TNFSF4P23510 TMEM14DP-201ENST00000422205 345 ntBASIC12.92□□□□□ -0.34
TNFSF4P23510 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.92□□□□□ -0.34
TNFSF4P23510 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.92□□□□□ -0.34
TNFSF4P23510 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.92□□□□□ -0.34
TNFSF4P23510 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.92□□□□□ -0.34
TNFSF4P23510 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.92□□□□□ -0.34
TNFSF4P23510 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.92□□□□□ -0.34
TNFSF4P23510 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.92□□□□□ -0.34
TNFSF4P23510 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.92□□□□□ -0.34
TNFSF4P23510 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.92□□□□□ -0.34
TNFSF4P23510 AC145423.3-201ENST00000615987 467 ntBASIC12.92□□□□□ -0.34
TNFSF4P23510 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.92□□□□□ -0.34
TNFSF4P23510 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TNFSF4P23510 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.92□□□□□ -0.34
TNFSF4P23510 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TNFSF4P23510 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.92□□□□□ -0.34
TNFSF4P23510 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TNFSF4P23510 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.92□□□□□ -0.34
TNFSF4P23510 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms