Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2B1P20020 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2B1P20020 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2B1P20020 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2B1P20020 TP53TG3HP-202ENST00000569755 579 ntBASIC17.41■□□□□ 0.38
ATP2B1P20020 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2B1P20020 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2B1P20020 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ATP2B1P20020 CU634019.7-201ENST00000624153 1185 ntBASIC17.41■□□□□ 0.38
ATP2B1P20020 FP236241.2-201ENST00000624906 1185 ntBASIC17.41■□□□□ 0.38
ATP2B1P20020 LINC00552-201ENST00000625151 2579 ntBASIC17.41■□□□□ 0.38
ATP2B1P20020 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2B1P20020 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.41■□□□□ 0.38
ATP2B1P20020 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2B1P20020 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2B1P20020 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
ATP2B1P20020 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2B1P20020 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.41■□□□□ 0.38
ATP2B1P20020 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2B1P20020 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
ATP2B1P20020 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
ATP2B1P20020 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATP2B1P20020 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2B1P20020 LINC01101-201ENST00000622953 1884 ntBASIC17.4■□□□□ 0.38
ATP2B1P20020 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2B1P20020 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2B1P20020 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 RNU1-114P-201ENST00000365297 166 ntBASIC17.4■□□□□ 0.38
ATP2B1P20020 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATP2B1P20020 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ATP2B1P20020 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 COX20P2-201ENST00000452636 358 ntBASIC17.4■□□□□ 0.38
ATP2B1P20020 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2B1P20020 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ATP2B1P20020 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2B1P20020 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 AC005252.2-201ENST00000624630 1141 ntBASIC17.4■□□□□ 0.38
ATP2B1P20020 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2B1P20020 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2B1P20020 MTHFR-210ENST00000641407 2387 ntBASIC17.4■□□□□ 0.38
ATP2B1P20020 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2B1P20020 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
ATP2B1P20020 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.38
ATP2B1P20020 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2B1P20020 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2B1P20020 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2B1P20020 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.39■□□□□ 0.38
ATP2B1P20020 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2B1P20020 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2B1P20020 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2B1P20020 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2B1P20020 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2B1P20020 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2B1P20020 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2B1P20020 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2B1P20020 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ATP2B1P20020 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms