Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SYN1P17600 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.1■□□□□ 0.17
SYN1P17600 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.1■□□□□ 0.17
SYN1P17600 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.1■□□□□ 0.17
SYN1P17600 PTPN20CP-201ENST00000614090 920 ntBASIC16.1■□□□□ 0.17
SYN1P17600 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.1■□□□□ 0.17
SYN1P17600 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 CTBP2P8-201ENST00000422584 1330 ntBASIC16.1■□□□□ 0.17
SYN1P17600 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SYN1P17600 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.1■□□□□ 0.17
SYN1P17600 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SYN1P17600 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SYN1P17600 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
SYN1P17600 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.09■□□□□ 0.17
SYN1P17600 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
SYN1P17600 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.09■□□□□ 0.17
SYN1P17600 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.09■□□□□ 0.17
SYN1P17600 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.09■□□□□ 0.17
SYN1P17600 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.09■□□□□ 0.17
SYN1P17600 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SYN1P17600 KRT17P5-201ENST00000332088 839 ntBASIC16.09■□□□□ 0.17
SYN1P17600 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SYN1P17600 KRT18P36-201ENST00000411618 1276 ntBASIC16.09■□□□□ 0.17
SYN1P17600 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.09■□□□□ 0.17
SYN1P17600 RPL35P9-201ENST00000446059 350 ntBASIC16.09■□□□□ 0.17
SYN1P17600 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.09■□□□□ 0.17
SYN1P17600 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.09■□□□□ 0.17
SYN1P17600 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.09■□□□□ 0.17
SYN1P17600 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.09■□□□□ 0.17
SYN1P17600 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.09■□□□□ 0.17
SYN1P17600 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.09■□□□□ 0.17
SYN1P17600 AC004686.1-201ENST00000605113 538 ntBASIC16.09■□□□□ 0.17
SYN1P17600 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.09■□□□□ 0.17
SYN1P17600 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SYN1P17600 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.09■□□□□ 0.17
SYN1P17600 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
SYN1P17600 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SYN1P17600 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SYN1P17600 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SYN1P17600 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SYN1P17600 REXO1L2P-201ENST00000425429 2069 ntBASIC16.09■□□□□ 0.17
SYN1P17600 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SYN1P17600 CICP11-201ENST00000434745 2827 ntBASIC16.09■□□□□ 0.17
SYN1P17600 MTHFR-217ENST00000641820 1569 ntBASIC16.09■□□□□ 0.17
SYN1P17600 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SYN1P17600 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYN1P17600 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYN1P17600 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYN1P17600 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.08■□□□□ 0.17
SYN1P17600 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SYN1P17600 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.08■□□□□ 0.17
SYN1P17600 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.08■□□□□ 0.17
SYN1P17600 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYN1P17600 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SYN1P17600 PCDH8P1-201ENST00000428983 2773 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms